PUBBLICAZIONI 2016

PUBBLICAZIONI 2016
Attività “Biocatalisi e bioraffinerie” (ENZIMI):
1.
V.V. Kollerov, T.G. Lobastova, D. Monti, N.O. Deshcherevskaya, E.E. Ferrandi, G. Fronza, S. Riva,
M.V. Donova
“Deoxycholic acid transformations catalyzed by selected filamentous”
Steroids, 107: 20-29 (2016)
2.
M. Bertolotti, E. Brenna, M. Crotti, F.G. Gatti, D. Monti, F. Parmeggiani, S. Santangelo
“Substrate scope evaluation of the enantioselective reduction of β-Alkyl-β-arylnitroalkenes by old yellow enzymes
1-3 for organic synthesis applications”
ChemCatChem, 8: 577-583 (2016)
3.
IF 2.639
IF 4.556
H. Oliveira, D.V. Boas, S. Mesnage, L.D. Kluskens, R. Lavigne, S. Sillankorva, F. Secundo, J. Azeredo
“Structural and enzymatic characterization of ABgp46, a novel phage endolysin with broad anti-gram-negative
bacterial activity “
Front. Microbiol., DOI: 10.3389/fmicb.2016.00208 (2016)
4.
IF 3.989
S. Wang, X. Meng, H. Zhou, Y. Liu, F. Secundo, Y. Liu
“Enzyme stability and activity in non-aqueous reaction systems: a mini review”
Catalysts, 6: 32 DOI: 10.3390/catal.6020032 (2016)
5.
IF 2.000
B. Rossi, P. Campia, L. Merlini, M. Brasca, N. Pastori, S. Farris, L. Melone, C. Punta, Y.M. Galante
“An aerogel obtained from chemo-enzymatically oxidized fenugreek galactomannans as versatile delivery system”
Carbohyd. Polym., 144: 353-361 (2016)
6.
IF 4.074
S. Savino, E.E. Ferrandi, F. Forneris, S. Rovida, S. Riva, D. Monti, A. Mattevi
“Structural and biochemical insights into 7β-hydroxy steroid dehydrogenase stereo selectivity”
Proteins, 84: 859-865 (2016)
7.
IF 2.627
E. Spadoni Andreani, L. Magagnin, F. Secundo
“Preparation and comparison of hydrolase-coated plastics”
Chemistry Select, 1: 1490-1495 (2016)
8.
no IF
P. Fu, F. Secundo
“Algae and their bacterial consortia for soil bioremediation”
Chem. Engineering Transaction, 49: 427-432 (2016)
9.
IF 0.820
C. Palumbo, E.E. Ferrandi, C. Marchesi, D. Monti, S. Riva, R. Psaro, M. Guidotti
“ One-pot selective dihydroxylation of limonene combining metal and enzyme catalysis”
Chemistry Select, 1: 1795-1798 (2016)
no IF
10. A. Romagnolo, F. Spina, S. Risso, M. Crotti, D. Monti, E. Brenna, L. Lanfranco, G.C. Varese
“Fungal oxidoreductases as biocatalysts for fine chemicals transformations”
Chem. Eng. Transactions, 49: 31-36 (2016)
IF 0.820
11. I. Bassanini, P. Gavezzotti, D. Monti, J. Krejzova, V. Kren, S. Riva
“Laccase-catalyzed dimerization of glycosylated lignols”
J. Mol. Catal. B_Enzymatic, 134: 295-301 (2016)
IF 2.189
12. L. Pistone, G. Ottolina, S. De, A.A. Romero, L.O. Martins, R. Luque
“Encapsulated laccases for the room-temperature oxidation of aromatics: towards synthetic low-molecular-weight
lignins”
ChemSusChem, 9: 756-762 (2016)
IF 7.657
Attività “Sviluppo di microsistemi analitici” (MICRO):
13. F. Damin, S. Galbiati, M. Ferrari, M. Chiari
“DNA microarray-based solid-phase PCR on cobol (DMA-NAS-MAPS) silicon coated slides: An example of
relevant clinical application”
Biosens. Bioelectron., 78: 367-373 (2016)
IF 6.409
14. M. Salina, F. Giavazzi, E. Ceccarello, F. Damin, M. Chiari, M. Ciuffo, G.P. Accotto, M. Buscaglia
“Multi-spot, label-free detection of viral infection in complex media by a non-reflecting surface”
Sensor Actuat. B-Chem., 223: 957-962 (2016)
IF 4.097
15. C. Finetti, L. Plavisch, M. Chiari
“Use of quantum dots as mass and fluorescence labels in microarray biosensing”
Talanta, 147: 397-401 (2016)
IF 3.545
16. P. Gagni, M. Cretich, L. Benussi, E. Tonoli, M. Ciani, R. Ghidoni, B. Santini, E. Galbiati, D. Prosperi,
M. Chiari
“Combined mass quantitation and phenotyping of intact extracellular vesicles by a microarray platform”
Anal. Chim. Acta, 902: 160-167 (2016)
IF 4.513
17. R. Castagna, A. Bertucci, E.A. Prasetyanto, M. Monticelli, D.V. Conca, M. Massetti, P.P. Sharma, F.
Damin, M. Chiari, L. De Cola, R.Bertacco
“Reactive microcontact printing of DNA probes on (DMA-NAS-MAPS) copolymer-coated substrates for efficient
hybridization platforms”
Langmuir, 32: 3308-3313 (2016)
IF 4.457
18. L. Benussi, M. Ciani, E. Tonoli, M. Morbin, L. Palamara, D. Albani, F. Fusco, G. Forloni, M. Glionna,
M. Baco, A. Paterlini, S. Fostinelli, B. Santini, E. Galbiati, P. Gagni, M. Cretich, G. Binetti, F.
Tagliavini, D. Prosperi, M. Chiari, R. Ghidoni
“Loss of exosomes in progranulin-associated frontotemporal dementia”
Neurobiol. Aging, 40: 41-49 (2016)
IF 5.013
19. G. Nava, E. Ceccarello, F. Giavazzi, M. Salina, F. Damin, M. Chiari, M. Buscaglia, T. Bellini, G.
Zanchetta
“Label-free detection of DNA single-base mismatches using a simple reflectance-based optical technique”
Phys. Chem. Chem. Phys., 18: 13395-13402 (2016)
IF 4.449
20. L. Sola, F. Damin, M. Cretich, M. Chiari
“Novel polymeric coatings with tailored hydrophobicity to control spot size and morphology in DNA microarray”
Sensor Actuat. B-Chem., 231: 412-422 (2016)
IF 4.097
21. C. Finetti, L. Sola, M. Pezzullo, D. Propsperi, M. Colombo, B. Riva, S. Avvakumova, C. Morasso, S.
Piccolini, M. Chiari
“Click chemistry immobilization of antibodies on polymer coated gold nanoparticles”
Langmuir, 32: 7435-7441 (2016)
IF 4.457
22. K. Mesbah, T. Duc Mai, T.G. Jensen, L. Sola, M. Chiari, J.P. Kutter, M. Taverna
“A neutral polyacrylate copolymer coating for surface modification of thiol-ene microchannels for improved
performance of protein separation by microchip electrophoresis”
Microchim. Acta, 183: 2111-2121 (2016)
IF 4.831
23. A. Gori, L. Sola, P. Gagni, G. Bruni, M. Liprino, C. Peri, G. Colombo, M. Cretich, M. Chiari
“Screening complex biological samples with peptide microarrays: the favorable impact of probe orientation via
chemoselective immobilization strategies on clickable polymeric coatings”
Bioconjugate Chem., 27: 2669-2677 (2016)
IF 4.500
24. L. Sola, F. Damin, P. Gagni, R. Consonni, M. Chiari,
“Synthesis of clickable coating polymers by postpolymerization modification: applications in microarray
technology”
Langmuir, 32: 10284-10295 (2016)
IF 4.457
25. S. Galbiati, A. Monguzzi, F. Damin, N. Soriani, M. Passiu, C Castellani, F. Natacci, C. Curcio, M.
Seia, F. Lalatta, M. Chiari, M. Ferrari, L. Cremonesi
“COLD-PCR and microarray: two independent highly sensitive approaches allowing the identification of fetal
paternally inherited mutations in maternal plasma”
J. Med. Gen., 53: 481-487 (2016)
IF 5.650
26. G.G. Daaboul, P. Gagni, L. Benussi, P. Bettotti , M. Ciani, M. Cretich, D.S. Freedman, R. Ghidoni, A.
Yalcin Ozkumur, C. Piotto, D. Prosperi, B. Santini, M.S. Ünlü, M. Chiari
“Digital detection of exosomes by interferometric imaging”
Sci. Rep. UK, 6: 37246, doi :10.1038/srep37246 (2016)
IF 5.578
Attività “Biochimica computazionale e drug design” (MODEL)
27. R. Capelli, F. Villemot, E. Moroni, G. Tiana, A. van der Vaart, G. Colombo
“Assessment of mutational effects on peptide stability through confinement simulations”
J. Phys. Chem. Lett., 7: 126-130 (2016)
IF 7.458
28. F. Chiappori, I. Merelli, L. Milanesi, G. Colombo , G. Morra
“An atomistic view of HSp70 allosteric crosstalk: from the nucleotide to the substrate binding domain and back”
Sci. Rep UK|6:23474|DOI:10.1038/SREP23474
(2016)
IF 5.578
29. G. Vettoretti, E. Moroni, S. Sattin, J. Tao, D.A. Agard, A. Bernardi, G. Colombo
“Molecular dynamics simulations reveal the mechanisms of allosteric activation of Hsp90 by designed ligands”
Sci. Rep. UK |6:23830|DOI:10.1038/SREP23830
(2016)
IF 5.578
30. C. Foglieni, K. Pagano, M. Lessi, A. Bugatti, E. Moroni, D. Pinessi, A: Resovi, D. Ribatti, S. Bertini,
L. Ragona, F. Bellina, M. Rusnati, G. Colombo, G. Taraboletti
“Integrating computational and chemical biology tools in the discovery of antiangiogenic small molecule ligands
of FGF2 from endogeneous inhibitors”
Sci. Rep. UK |6:23432| DOI:10.1038/srep23432
(2016)
IF 5.578
31. C. Peri, G. Morra, G. Colombo
“Surface energetics and protein-protein interactions: analysis and mechanistic implications”
Sci. Rep. UK |6:24035| DOI:10.1038/srep24035
(2016)
IF 5.578
32. A. Gori, C. Peri, G. Quilici, A. Nithichanon, D. Gaudesi, R. Longhi, L. Gourlay, M. Bolognesi, G.
Lertmemongkolchai, G. Musco, G. Colombo
“Flexible vs rigid epitope conformations for diagnostic-and vaccine-oriented applications: novel insights from the
Burkholderia pseudomallei BPSL2765 Pal3 epitope”
ACS Infect.Dis., 2: 221-230 (2016)
no IF
33. F. Villemot, R. Capelli, G. Colombo, A. van der Vaart
“Balancing accuracy and cost of confinement simulations by interpolation and extrapolation of confinement
energy”
J. Chem. Theory Comput., 12: 2779-2789 (2016)
IF 5.301
34. S. Sattin, M. Panza, F. Vasile, F. Berni, G. Goti, J Tao, E. Moroni, D. Agard, G. Colombo, A. Bernardi
“Synthesis of functionalized 2-(4-Hydroxyphenyl)—3-methylbenzofuran allosteric modulators of Hsp90 activity”
Eur. J. Org. Chem., 3349-3364 (2016)
IF 3.068
35. C. Peri, A. Gori, P. Gagni, L. Sola, D. Girelli, S. Sottotetti, L. Cariani, M. Chiari, M. Cretich, G.
Colombo
“Evolving serodiagnostics by rationally designed peptide arrays: the Burkholderia paradigm in cystic fibrosis”
Sci. Rep. UK |6:32873| DOI: 10.1038/srep32873 (2016)
IF 5.578
36. F. Piancone, M. Saresella, I. Marventano, F. La Rosa, M. Zoppis, S. Agostini, R. Longhi, D. Caputo, L.
Mondozzi, M. Rovaris, M. Clerici
“B Lymphocytesin in multiple sclerosis: bregs and BTLA/CD272 expressing-CD19+lymphocytes modulate
disease severity”
Sci. Rep. UK|6:29699| DOI: 10.1038/srep29699 (2016)
IF 5.578
37. J. Sgrignani, A. Cavalli, G. Colombo, A. Magistrato
“Enzymatic and inhibition mechanism of human aromatase (CYP19A1) enzyme, A computational perspective
from QM/MM and classical molecular dynamics simulations”
Mini-Reviews in Medicinal Chemistry, 16: 1112-1124 (2016)
IF 2.841
38. J. Sgrignani, F. De Luca, H. Torosyan, J.D.-Docquier, D. Duan, B. Novati, F. Prati, G. Colombo, G.
Grazioso
“Structure-based approach for identification of novel phenylboronic acids as serine-β-lacatamase inhibitors”
J. Comput. Aided Mol. Des., 30: 851-861 (2016)
IF 3.199
39. A. Rehn, E. Moroni, B.K. Zierer, F. Tippel, G. Morra, C. John, K. Richter, G. Colombo, J. Buchner
“Allosteric regulation points control the conformational dynamics of the molecular chaperone Hsp90”
J. Mol. Biol., 428: 4559-4571 (2016)
IF 4.517
40. O. Sensoy, I.S. Moreira. G. Morra
“Understanding the differential selectivity of Arrestins toward the phosphorylation state of the receptor”
ACS Chem. Neurosci., 7: 1212-1224 (2016)
IF 4.348
41. S. Ficarra, E. Tellone, D. Pirolli, A. Russo, D. Barreca, A. Galtieri, B. Giardina, P. Gavezzotti, S.
Riva, M.C. De Rosa
“Insights into the properties of the two enantiomers of trans-δ-viniferin, a resveratrol derivative: antioxidant
activity, biochemical and molecular modeling studies of its interactions with hemoglobin”
Mol. Biosyst., 12: 1276-1286 (2016)
IF 3.210
42. T.G. Kirubakaran, H. Grove, M.P. Kent, S.R. Sandve, M. Baranski, T. Nome, M.C. De Rosa, B.
Righino, R. Johansen, H. Ottera, A. Sonesson, S. Lien, I. Andersen
“Two adjacent inversions maintain genomic differentiation between migratory and stationary ecotypes of Atlantic
cod”
Mol. Ecol., 25: 2130-2143 (2016)
IF 6.494
Attività : “Studio di processi biologici mediante tecniche di proteomica e di biologia
molecolare” (PROMOL)
43. A. Vitali, E. Vavala, V. Marzano, C. Leone, M. Castagnola, F. Iavarone, L. Angiolella
“Cell wall composition and biofilm fomration of azoles-susceptible and resistant Candida glabrata strains”
J. Chemotherapy, http://dx.doi.org/10.1080/1120009x.2016.1199507 (2016)
IF 1.333
44. P. de Fatima Menegoci Eugenio, N. A. Assunçao, F. Sciandra, A. Aquino, A. Brancaccio, E. Carrilho
“ Quantification, 2DE analysis and identification of enriched glycosylated proteins from mouse muscles:
difficulties and alternatives”
Electrophoresis, 37: 321-334 (2016)
IF 3.028
45. D.M. Paul, F. Beuron, R.B. Sessoins, A. Brancaccio, M.G. Bigotti
“Internal (His)6-tagging delivers a dully functional hetero-oligomeric class II chaperonin in high yield”
Sci. Rep. UK, 6:20696|DOI: 10.1038/srep20696
IF 5.578
46. G. Tringali, B. Sampaolese, M.E. Clementi
“Expression of early and late cellular damage markers by ARPE-19 cells following prolonged treatment with UVA radiation”
Mol. Med. Rep., 14: 3485-3489 (2016)
IF 1.670
47. B. Manconi, M. Castagnola, T. Cabras, A. Olianas, A. Vitali, C. Desiderio, M.T. Sanna, I. Messana
“The intriguing heterogeneity of human salivary proline-rich proteins Short title: Salivary proline-rich protein
species”
J. Proteomics, 134: 47-56 (2016)
IF 3.888
48. C.A. Palmerini, M. Mazzoni, G. Radicioni, V. Marzano, L. Granieri, F. Iavarone, R. Longhi, I.
Messana, T. Cabras, M.T. Sanna, M. Castagnola, A. Vitali
“Antagonistic effect of a salivary proline-rich peptide on the cytosolic Ca2+ mobilization induced by progesterone
in oral squamous cancer cells”
Plos One, DOI: 10.1371/journal.pone.0147925
IF 3.234
49. L. Chronopoulou, G. Nocca, M. Castagnola, G. Paludetti, G. Ortaggi, F. Sciubba, M. Bevilacqua, A.
Lupi, G. Gambarini, C. Palocci
“Chitosan based nanoparticles functionalized with peptidomimetic derivatives for oral drug delivery”
New Biotechnol., 33: 23-31 (2016)
IF 2.898
50. C. Martelli, L. D’Angelo, M. Barba, M. Baranzini, I. Inserra, F. Iavarone, F. Vincenzoni, G.
Tamburrini, L. Massimi, C. Di Rocco, M. Caldarelli, I. Messana, F. Michetti, M. Castagnola, W.
Lattanzi, C. Desiderio
“Top-down proteomic characterization of DAOY medulloblastoma tumor cell line”
EuPA Open Proteomics, 12: 13-21 (2016)
no IF
51. I. Inserra, C. Martelli, M. Cipollina, C. Cicione, F. Iavarone, G. Di Taranto, M. Barba, M. Castagnola,
C. Desiderio, W. Lattanzi
“Lipoaspirate fluid proteome: A preliminary investigation by LC-MS top-down/bottom-up integrated platform of a
high potential biofluid in regenerative medicine”
Electrophoresis, 37: 1015-1026 (2016)
IF 3.028
52. C. Martelli, V. Marzano, F. Iavarone, L. Huang, F. Vincenzoni, C. Desiderio, I. Messana, P. Beltrami,
F. Zattoni, P.M. Ferraro, N. Buchholz, G. Locci, G. Faa, M. Castagnola, G. Gambaro
“Characterization of the protein components of matrix stones sheds light on S100-A8 and S100-A9 relevance in
the inflammatory pathogenesis of these rare renal calculi”
J. Urology, 196: 911-918 (2016)
IF 4.700
53. M.E. Clementi, B. Sampaolese, B. Giardina.
“S100b induces expression of Myoglobin in APβ treated neuronal cells in vitro: a possible neuroprotective
mechanism”.
Curr. Aging Sci., 9: 279-283 (2016)
no IF
54. B. Righino, D. Pirolli, G. Radicioni, V. Marzano, R. Longhi, A. Arcovito , M.T. Sanna, M.C. De Rosa,
S. Paoluzi, G. Cesareni, I. Messana, M. Castagnola, A. Vitali.
“Structural studies and SH3 domain binding properties of a human antiviral salivary proline-rich peptide”
Biopolymers, 106: 714-725 (2016)
IF 2.248
55. G. Faa, I. Messana, V. Fanos, T. Cabras, B. Manconi, G. Vento, F. Iavarone, C. Martelli, C. Desiderio,
M. Castagnola.
“Proteomics applied to pediatric medicine: opportunities and challenges”
Expert Rev. Proteomics, 213: 883–894 (2016)
IF 3.465
56. B. Manconi, T. Cabras, M. Sanna, V. Piras, B. Liori, E. Pisano, F. Iavarone, F. Vincenzoni, M. Cordaro,
G. Faa, M. Castagnola, I. Messana
“N- and O-linked glycosylation site profiling ot the human basic salivary proline-rich protein 3M”
J. Sep. Sci., 39: 1987-1997 (2016)
IF 2.741
57. C. Brancia, B. Noli, M. Boido, A. Boi, R. Puddu, G. Borghero, F. Marrosu, P. Bongioanni, S. Orrù, B.
Manconi, F. D'Amato, I. Messana, F. Vincenzoni, A. Vercelli, G.L. Ferri, C. Cocco.
“VGF Protein and Its C-Terminal Derived Peptides in Amyotrophic Lateral Sclerosis: Human and Animal Model
Studies”.
PLoS One, 11(10):e0164689. doi: 10.1371/journal.pone.0164689. eCollection 2016.
IF 3.540
58. M. Arba, F. Iavarone, F. Vincenzoni, B. Manconi, G. Vento, C. Tirone, T. Cabras, M. Castagnola, I.
Messana, M.T. Sanna.
“Proteomic characterization of the acid-insoluble fraction of whole saliva from preterm human newborns”.
J. Proteomics, 146: 48-57 (2016)
IF 3.867
Attività “Sintesi e caratterizzazione di peptidi e composti bioattivi” (SINTEX)
59. C. Tseng, I.R. Greig, W.T.A. Harrison, M. Zanda
“Asymmetric synthesis and absolute configuration of (+)- and (-)-perhexiline”
Synthesis, 48: 73-78 (2016)
IF 2.689
60. A. Graziadio, M. Zanda, S. Frau, I.N. Fleming, M. Musolino, S. Dall’Angelo, M. Baldassarre, M. Piras
“NGR Tumor-homing peptides: structural requirements for effective APN (CD13) targeting”
Bioconjugate Chem., 27: 1332-1340 (2016)
IF 4.500
61. P. Lazzari, R. Distinto, I. Manca, G. Baillie, G. Murineddu, M. Pira, M. Falzoi, M. Sani, P. Morales, R.
Ross, M. Zanda, N. Jagerovic, G.A. Pinna
“A critical review of both the synthesis approach and the receptor profile of the 8-chloro-1-(2’4’-dichlorophenyl)N-piperidin-1-yl-1,4,5,6-tetrahydrobenzo[6,7]cyclohepta[1,2-c]pyrazole-3-carboxamide and analogue derivatives”
Eur. J. Med. Chem., 121: 194-208 (2016)
IF 3.902
62. E. Macerata, E. Mossini, S. Scaravaggi, M. Mariani, A. Mele, W. Panzeri, N. Boubals, L. Berthon,
M.C. Charbonnel, F. Sansone, A. Arduini, A. Casnati
“Hydrophillic clicked 2,6-bis-triazolyl-pyridines endowed with high actinide selectivity and radiochemical
stability: toward a closed nuclear fuel cycle”
J. Am. Chem. Soc., 138: 7232-7235 (2016)
IF 13,038
63. M. Ferro, M. F. Castiglione, C. Punta, L. Melone, A. Mele, W. Panzeri, , B. Rossi, F. Trotta,.
“Transport properties of ibuprofen encapsulated in cyclodextrin nanosponge hydrogels: a proton HR-MAS NMR
spectroscopy study”
JOVE, 114: e53769 (2016)
IF 1,100
64. S. Serra, D. De Simeis
“A Study on the lipase-catalysed acylation of 6,7-dihydroxy-linalool ”
Nat. Prod. Comm., 11: 1217-1220 (2016)
IF 0.906
65. A. Bedeschi, P. Fonte, G. Fronza, C. Fuganti, S. Serra,
“The co-identity of Lipiarmycin A3 and Tiacumicin B”
Nat. Prod. Comm., 11: 569-572 (2016)
IF 0.906
66. E. Rosini, C. Allegretti, R. Melis, L. Cerioli, G. Conti, L. Pollegioni, P. D’Arrigo
“Cascade enzymatic cleavage of the β-O-4 linkage in a lignin model compound”
Catal. Sci. Technol. 6: 2195-2205 (2016)
IF 5.426
67. F. Rossi, F. Castiglione, M. Ferro, M. Moioli, A. Mele, M. Masi
“The role of drug-drug interactions in hydrogel delivery systems: experimental and model study”
Chem. Phys. Chem., 17: 1-9 (2016)
IF 3.138
68. J. von Zamory, G.A. Giffin, S. Jeremias, F. Castiglione, A. Mele, E. Paillard, S. Passerini
“Influence of oligo(ethylene oxide) substituents on pyrrolidinium-based ionic liquid properties, Li solvation and
transport”
Phys. Chem. Chem. Phys., 18: 21539-21547 (2016)
IF 4.449
69. M. Casalegno, F. Castiglione, M. Passarello, A. Mele, S. Passerini, G. Raos
“Association and diffusion of Li in carboxymethylcellulose solutions for environmentally friendly Li-ion
batteries”
Chem.Sus.Chem., 9: 1804-1813 (2016)
IF 7.657
70. F. Rossi, F. Castiglione, M. Ferro, M. Moioli, A. Mele, M. Masi
“The role of drug-drug interactions in hydrogel delivery systems: experimental and model study ”
Chem. Phys. Chem., 17: 1615-1622 (2016)
IF 3.138